Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSALVGVIMGSKSDWSTLSHTADMLDKLGIPYEVKVVSAHRTPDLLFQYAEEAEGRGLEVIIAGAGGAAHLPGMCAAKTHLPVLGVPVQSSMLSGVDSLLSIVQMPAGVPVATLAIGKAGAVNAALLSASILGAKHPQYHEALKQFRANQTETVLDNPDPRDA
2FW1 Chain:B ((24-181))
---VVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWRALQTASVPNSPITE--
General information:
TITO was launched using:
RESULT:
Template:
2FW1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130162 for 1304 contacts (-99.8/contact) +
2D Compatibility (PS) -17247 + (NN) -7688 + (LL) 392
1D Compatibility (HY) -15600 + (ID) 4950
Total energy: -175255.0 ( -134.40 by residue)
QMean score : 0.627
(partial model without unconserved sides chains):
PDB file :
Tito_2FW1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FW1-query.scw
PDB file :
Tito_Scwrl_2FW1.pdb
: