Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMRFSGISGCLSAAVLALGVGGAPVVQADALGDSLEQAHIRKATFAA-PAWEGYTNAD----GSGLYWDLLKQVYAPYGLDVKFINMPWNRANKLMTAGS---M-VDGVPGEIPGVE-GKLYAQLPIDIEYHGVMHAAKT--PFSGRASLT--GKRVGWRHSYNLIPAEQR---DFTLVECVRPERCTEQVQNGELDFFLDEPDELEKQRSEAHLPADAYPIAQLPPGKESFMTFADSASGRLLREVYDARVRQMAASGELRALYQRWNSEVPGAVQALSAQ |
| 3KBR Chain:A ((8-236)) | ----------------------------------LDRILESGVLRVATTGDYKPFSYRTEEGGYAGFDVDMAQRLAESLGAKLVVVPTSWPNLMRDFADDRFDIAMSGISINL--ERQRQAYFSI-PYLRDGKTPITLCSEEARFQTLEQIDQPGVTAIVNPGGTNEKFARANLKKARILVHPDNVTIFQQIVDGKADLMMTDAIEARLQSRLHP-ELCAVHPQPFDF-AEKAYLLPRD---EAFKRYVDQWLHIAEQSGLLRQRMEHWL------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59638 for 1600 contacts (-37.3/contact) +
2D Compatibility (PS) -22904 + (NN) -3760 + (LL) 3212
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -87740.0 ( -54.84 by residue)
QMean score : 0.426
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