Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQ-KPVCLVVAMT-PKRGIGINNGLPWPHLTTDFKHFSRVTKTTPEEASRLNGWLPRKFAKTGDSGLPSPSVGKRFNAVVMGRKTWESMPRKFRPLVDRLNIVVSSSLKEEDIAAEKPQAEGQQRVRVCASLPAALSLLEEEYKDSVDQIFVVGGAGLYEAALSLGVASHLYITRVA----REFPCDVFFPAFPGDDILSNKSTAAQAAAPAESVFVPFCPELGREKDNEATYRPIFISKTFSDNGVPYDFVVLEK
1AOE Chain:A ((1-191))
MLKPNVAIIVAALKPALGIGYKGKMPW-RLRKEIRYFKDVTTRTTKP--------------------------NTRNAVIMGRKTWESIPQKFRPLPDRLNIILSRSYENEI---------IDDNIIHASSIESSLNLVS-----DVERVFIIGGAEIYNELINNSLVSHLLITEIEHPSPESIEMDTFLK-FP-------LESWTKQPKSELQKFVGDT----------------VLEDDIKEGDFTYNYTLWTR
General information:
TITO was launched using:
RESULT:
Template:
1AOE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152684 for 1349 contacts (-113.2/contact) +
2D Compatibility (PS) -20111 + (NN) -11446 + (LL) 2064
1D Compatibility (HY) -18400 + (ID) 3050
Total energy: -203627.0 ( -150.95 by residue)
QMean score : 0.354
(partial model without unconserved sides chains):
PDB file :
Tito_1AOE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AOE-query.scw
PDB file :
Tito_Scwrl_1AOE.pdb
: