Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEENHTMKNEFILTGFTDHPELKTLLFVVFFAIYLITVVGNISLVALIFTHRRLHTPMYIFLGNLALVDSCCACAITPKMLENFFSENKRISLYECAVQFYFLCTVETADCFLLAAMAYDRYVAICNPLQYHIMMSKKLCIQMTTGAFIAGNLHSMIHVGLVFRLVFCGSNHINHFYCDILPLYRLSCVDPYINELVLFIFSGSVQVFTIGSVLISYLYILLTIFKMKSKEGRAKAFSTCASHFLSVSLFYGSLFFMYVRPNLL-----E-E---G-DKDIPA--AILFTIVVPLLNPFIYSLRNREVISVLRKILMKK |
2LNL Chain:A ((39-323)) | -----------------------KYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALT-LPIWAASK-VNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLT-QKRHLVKFVCLGCWGLSMNLSLPFFLFRQA--Y-HP-NNSSPVCYEVLGND----TAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAH-MGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200741 for 1981 contacts (-101.3/contact) +
2D Compatibility (PS) -26733 + (NN) 398 + (LL) 2812
1D Compatibility (HY) -21200 + (ID) 2300
Total energy: -247764.0 ( -125.07 by residue)
QMean score : 0.221
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