Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MLRVVEGIFIFVVVSESVFGVLGNGFI-----GLVNCIDCAKNKLS--TIG-------------FI----------LTGLAISRIFLIWIIITDGFIQIFSPNIY------ASGNLIE-YISYFWVIGNQSSMWFATSLSIFYFLKIANFSNYIFLWLKSRTNMVLPF-MIVFLLISSLLNFAYIAKILNDYKTKNDTVWDLNMYKSEYFIKQI-----LLNLGVIFFFTLSLITCIF-LIISLWRHNRQMQSNVTGLRDSNTEA-----HVKAMKVLISFIILFILYFIGMAIEISCFTVRENKLLL------MFGMTTTAIYPWGHSFILILGNSKLKQASLRVLQQLKCCEKRKNLRVT |
| 4UVJ Chain:A ((2-387)) | DSVKEIVLPLFYDLLNAASILCPLLESFITFSETELKKITDKTIKAFMDSTIGNSKVDMKYDIFAKFIHHIHHFEKKELQEKFLNQIATLKIHLKKFLQEKMDPNNSRDDYKDLTCSLYELYINKLTILGRDYPIEVDEELLQLFLNNFVSRIPIMFQDFDDSTAQEINFKMLVLLATWNLEKWREIIEKVRDLRSVWKPIAAIIGRLNTLVISLAATNETFENINSLFYLKWSACTSLMDIIVAIKIFELKLPADATTWRYSMSEQFPFYLHDNASKVLLKIFLYLESLFAKQVDVQLERVADEDANLNDLPETGFFENIETEFLLFTVKLKGLMKLNILDERFASRVALNKEKLGPLFKKIV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -291962 for 2176 contacts (-134.2/contact) +
2D Compatibility (PS) -30495 + (NN) -2059 + (LL) 0
1D Compatibility (HY) -14800 + (ID) 2750
Total energy: -342066.0 ( -157.20 by residue)
QMean score : 0.168
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