Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMSFLHIVFSILVVVAFILGNFANGFIALINFIAWVKRQKISSADQIIAALAVSRVGLLWVILLHWYSTVLNPTSSNLKVIIFISNAWAVTNHFSIWLATSLSIFYLLKIVNFSRLIFHHLKRKAKSVVLVIVLGSLFFLVCHLVMKHTYINVWTEECEGNVTWKIKLRNAMHLSNLTVAMLANLIPFTLTLISFLLLIYSLCKHLKKMQLHGKGSQDPSTKIHIKALQTVTSFLILLAIYFLCLIISFWNFKMRPKEIVLMLCQAFGIIYPSFHSFILIWGNKTLKQTFLSVLWQVTCWAKGQNQSTP |
| 1JK9 Chain:B ((3-245)) | ----TNDTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVES-------------------SVAPSTIINTLRNCGKDAIIRGAG---KPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGE-----------NKTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWHKFD-----------------EPIECFNESDLGKNL---YSGKTFLSAPLPTWQLIGRSFVISKSLNHPENEPSSVKDYSFLGVIARSAG----VWENNKQVCACTGK----TVWEERKDALA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JK9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225859 for 1824 contacts (-123.8/contact) +
2D Compatibility (PS) -25713 + (NN) 5957 + (LL) 8060
1D Compatibility (HY) 1200 + (ID) 1200
Total energy: -237555.0 ( -130.24 by residue)
QMean score : 0.093
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