Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-VVCS--SVELNVCTPALVMSSE-PSKLCCQKAMEQRPCYCEFLRDPN------------LKQF--FSNAADRRLANACGFPYPVCGY------------
1FK5 Chain:A ((1-93))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNA----ARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIP---YTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14236 for 362 contacts (-39.3/contact) +
2D Compatibility (PS) -6459 + (NN) -2114 + (LL) 460
1D Compatibility (HY) -800 + (ID) 550
Total energy: -23699.0 ( -65.47 by residue)
QMean score : 0.343
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: