Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVRLIPDNLNIKFSKYRKLTALISIILVIFSLFIVVLRGVNLGIDFTGGILMEIKSSSEDHAVLNILKENGF-TIQSSKAGNNLVMYFREEGNEGKIKKIKSVLEEKLGSSISYRKIDYIGPRISSTQILEGILSMFIAIVGIFFYVWFRFNWQCGFGGTIALIHDVILTVGFVSLTGIKFNISSVAALLTVIGYSINNSVVIYDRIREYQKSGKNRQMSDIVDASINVTLFRTVLTSGTTLLATIPLTLICTDTVRDFSLIIFFGILIGTCSAIFISAPILTCKVLISRIAV |
| 2HIY Chain:A ((25-72)) | -------------------------------------------------------------AELRQELTNLGLEKVESYINSGNIFFTSIDS-KAQLVEKLETFFAVHYPFIQSFSLLSLEDFEAELENLPAWWSRDLARKDFLFYTEGLDVDQVIATVESLELKDEVLYFGKLGIFWGKFSEESYSKTAYHKYLLKVPFYRHITIRNAKTFDKIGQMLKK------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7680 for 247 contacts (-31.1/contact) +
2D Compatibility (PS) -5107 + (NN) -2171 + (LL) 10828
1D Compatibility (HY) -3200 + (ID) 250
Total energy: -7580.0 ( -30.69 by residue)
QMean score : 0.580
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