Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGNIKTISVKDNNVRLDRYIRRIFPNLKQSVIEKSLRRGLIKVNDCKAKSSDRVNSGQIITIKYLDYIENANSDCKHNEKLVELLRSNILYEDEYILAINKPAGVIVQGGIKVKISISDLLDQVREGETFKIVHRLDRDTSGAIIFARNANVARYLMEEFKGRRVKKTYLALTSGIPSKNRGVIDYPLVKKYVSGQEKVVIDKNSPQDATTRFSIIAKFKLNKPLVQRPIIQVADTQLYEHCNLSLSRVCHLSSLSSCYSSALLCHLSAPILVSSKTDHKQAHYTTFSIKKLDSSIMCRNDTRSVAYLKLQPITGRTHQLRTHLAYINCPILGDGKYGGKKAFVDGIASKIHLHSYSLSLKLPNNKKITITAPLPEHIKKSIEALHTPF |
3DH3 Chain:A ((4-147)) | ----------DSSVRLNKYISESG-ICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLI---------------E----PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNH---SKRVFPIGRLDKDSQGLIFLTNHGDLVNKILRAG--NDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEV------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DH3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56521 for 921 contacts (-61.4/contact) +
2D Compatibility (PS) -15095 + (NN) -260 + (LL) 10004
1D Compatibility (HY) -4800 + (ID) 1550
Total energy: -68222.0 ( -74.07 by residue)
QMean score : 0.498
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