Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKEDIINKLKQACSSQDVEITKSDLSKIFDALMKIIKGKLDEEGEIRLHGIGTFSTAISQEKQCRNPQNGEIMTVPQKTRVKFKASQTLLSILNKEKEEVIS
2IIE Chain:A ((47-139))
LTKAEMSEYLFDK-----LGLSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENAGGGERI
General information:
TITO was launched using:
RESULT:
Template:
2IIE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7448 for 499 contacts (-14.9/contact) +
2D Compatibility (PS) -9685 + (NN) -2741 + (LL) 44
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -26030.0 ( -52.16 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_2IIE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IIE-query.scw
PDB file :
Tito_Scwrl_2IIE.pdb
: