Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLAIKTRVKTAKGRKLSSTRWLHRHLNDQYVQKTNKDSYRSRSAYKLIEIDNKFKLLQAGQKIVDLGASPGGWSQVASQK--GVKVVAIDIKPVNTI--------S-GVKYI-Q-YDINE-LETLRERFKDQKFDVILSDMAPESCGLKSLDHIRIMLLCEAALNFAKHFLN-YGGKFVVKIFQGESDKD-F--YNELKKMFKIVKYFKPKSSRSESTEMYLVGLGFISNSFPI |
3LKZ Chain:A ((92-249)) | --------------------------------------------------------LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRP--------SECCDTLLCDIGESSSSAE-VEE----HRTIRVLEMVEDWLHRGPREFCVKVLC-PYMPKVIEKMELLQRRYG-GGLVRNPLSRNSTHEMYWVSRASGNVVHSV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LKZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55412 for 1053 contacts (-52.6/contact) +
2D Compatibility (PS) -15340 + (NN) -5935 + (LL) 5844
1D Compatibility (HY) -6800 + (ID) 1300
Total energy: -78943.0 ( -74.97 by residue)
QMean score : 0.403
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