Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAYEHKWYIIKVNYGHERNILELVSNAVYFKEVFIPYQTVCNSKSDIKEVCEVYVCMYLCDESRDILSKTLGFHSGDSSNFKIVLDEEVNLKRKEFNKYKWYILRVASNYEEKVCQHVLENSMRLGVNDYFKEVFIPYEELSEVELRSKKAAMRRKCFPGYVFLYVDLCD-----EVLNFVNNIPKSLKVYGFLKNGSVPKVISDDEIYSMCNALYNAQETKKLSHGYEKGEKVKINDGLFQNFTGKVDMINDEKKIINIEVSILGKPTIIELDLAQVEKIED |
1NZ8 Chain:A ((2-118)) | -------------------------------------------------------------------------------------------------SIEWYAVHTLVGQEEKAKANLEKRIKAFGLQDKIFQVLIPTEEVVELREGGKKEVVRKKLFPGYLFIQMDLGDEEEPNEAWEVVRGTPGIT---GFVGAGMRPVPLSPDEVRHILEVSGLLG---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NZ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75536 for 746 contacts (-101.3/contact) +
2D Compatibility (PS) -12114 + (NN) -4387 + (LL) 12352
1D Compatibility (HY) -4400 + (ID) 1750
Total energy: -85835.0 ( -115.06 by residue)
QMean score : 0.561
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