Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTMSKSSDALFNSLTQSFELIEGVYNELVTDNLKIVMYKPRKESTSGRINRRFK
1HNX Chain:V ((1-24))
--------GKGDRRTRRGKIWRGTYGKYRPRK----------------------
General information:
TITO was launched using:
RESULT:
Template:
1HNX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3225 for 123 contacts (-26.2/contact) +
2D Compatibility (PS) -2484 + (NN) 918 + (LL) 1944
1D Compatibility (HY) 800 + (ID) 150
Total energy: -2197.0 ( -17.86 by residue)
QMean score : 0.139
(partial model without unconserved sides chains):
PDB file :
Tito_1HNX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HNX-query.scw
PDB file :
Tito_Scwrl_1HNX.pdb
: