Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------MQFEMRK-----IAFNAPKAFSLEHEG-------VVLEGEIVRVG---AKLFRLKARLKGELMLICDTSGKEFKKSLD---ESLVLHISDGLWDTQS--QSLDFDNLDVIESFNGFIDLSEILRSEVESIKLDYHYAD------------------------- |
3QS2 Chain:A ((16-188)) | ADVTAQAVATWSATAKKDTTSKLVVTPLGSLAFQYAEGIKGFNSQKGLFDVAIEGDSTATAFKLTSRLITNTLTQLDTSGSTLNVGVDYNGTAVEKTGDTVMIDTANGVLGGNLSPLANGYNASNRTTAQDGFTFSIISGTTNGTTAVTDYSTLPEGIWSGDVSVQFDATWTS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QS2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5036 for 711 contacts (-7.1/contact) +
2D Compatibility (PS) -11975 + (NN) 6127 + (LL) 0
1D Compatibility (HY) 2400 + (ID) 850
Total energy: -9334.0 ( -13.13 by residue)
QMean score : 0.179
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