Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLISIAFLLVLCLLNYSSFRMLKSFLTLKKISRYAYLGFFILLSAGEATFVFYRNVMPSHLFVLTSACSFVSFIAFVFSLSFYGFSYSVEKIDFLPSRRKGLKNFLRIGFYLALLGYFWRGFYEGLARPKIKETPIYLDKLDKELKIILLTDMHVGSLLQ----------------------KDFVNYIVEEVNQKEVDMVLIGGDLVDENIE-KVKSFLLPLNNLK-STHGTFYVPGNHEYYHGIE-----------------PILSFLNTLDMT-ILGN-----ECVHL--GGINLCGVYDYFARK-------------RQDFAPDIDKALKKRD-SSKPTILLAHQPKQIR---------------SLKESHSIDLVLSGHTHAGQIFPFSLLVKLAQTYLHGLYKHSGTTQIYVSSGAGYWGIPLRFLAPSEIAYLRLLPKNQA |
| 2XMO Chain:A ((37-289)) | ---------------------------------------------------------------------------------------------------------------------------------------------DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEKTSHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVKGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSVFPHKYGNITYSAKNKNFTYQSQKLDMEAWAKAQGSTD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92226 for 1298 contacts (-71.1/contact) +
2D Compatibility (PS) -18331 + (NN) -6426 + (LL) 12172
1D Compatibility (HY) -7600 + (ID) 1500
Total energy: -113911.0 ( -87.76 by residue)
QMean score : 0.435
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