Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSKSLEALHHVKRYRKRE------------LFDPLLKDYASNDYLGLSVKKDLLQNAFDKLQSFDCHSPKASMLVNGYHPLHAELEERLADLLEFESALLVGSGFLGNLALIDTLLVKNALLFMDAHYHASGIFSTKIKPNQVIFFSHNDIKDLKQKLFNAPKNKLKFIAI--EGVYSMDASIAPYDFYEIIQETPNAFLIVDEAHSFGTIGENLLGFLEYHRIKEKDKIIKLSTFSKALASY-GACVLAPLQVIEFLTNRAKSVIYTTALSLLDTALTLAHLEYFIAQ--KQELKNELSKHQQIIFETLGV---RTPTGFFTLEFENNP-ALLNAQYFLKEKGFLVGAIRPPTVS--KPLLRVSLSLKNSLEDTKELANALLDYSKIQSSFKSG |
| 1FC4 Chain:A ((13-399)) | --TNDLETARAEGLFKEERIITSAQQADITVADGSHVINFCANNYLGLANHPDLIAAAKAGMD-SHGFGMASVRFICGTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDII-TGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAGFTLAGADHAIIPVMLGDAVVAQKFARE-LQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLGVIA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201826 for 3189 contacts (-63.3/contact) +
2D Compatibility (PS) -39447 + (NN) -13288 + (LL) 704
1D Compatibility (HY) -12000 + (ID) 4400
Total energy: -270257.0 ( -84.75 by residue)
QMean score : 0.440
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