Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNKRSQNSPYVTPDNPYLTLEKALGYSFKDKRLLEQALTHKSCKLALNNERLEFLGDAVLGLVIGELLYHKFYQYDEGKLSKLRASIVSAHGFTKLAKAIALQDYLRVSSSEEISKGREKPSILSSAFEALMAGVYLEAGLAKVRKIIQNLLNRAYKRLDLE-----HLFMDYKTALQELTQAQFCVIPTYQLLQEKGPDHHKEFEMALYIQDKMYAT-AKGKSKKEAEQQCAYQALQKLKEAK
1YZ9 Chain:B ((7-220))--------------------LEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIR------IKRGKINETIIGDVFQALWAAVYIDSG--RDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEES-


General information:
TITO was launched using:
RESULT:

Template: 1YZ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91232 for 1507 contacts (-60.5/contact) +
2D Compatibility (PS) -22416 + (NN) -4787 + (LL) 1392
1D Compatibility (HY) -16000 + (ID) 4300
Total energy: -137343.0 ( -91.14 by residue)
QMean score : 0.474

(partial model without unconserved sides chains):
PDB file : Tito_1YZ9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YZ9-query.scw
PDB file : Tito_Scwrl_1YZ9.pdb: