Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTLGLSSLGGTLEFYDFIIFVFFTSIIAKHFFPNTLSPIWSEINTYGIFAAGYLARPLGGIVMAHFGDKFGRKNMFMLSILLMVIPTFALALMPTFNDLVGFGVDSMGLTPKNAHYLGYIAPVFLVLVRICQGVAVGGELPGAWVFVHEHAPQGQKNTYIGFLTASVVSGILLGSLVYIGIYMVFDKPVVEDWAWRVAFGLGGIFGIISVYL-RRFLEETPVFQQMKQDDALVKFPLKEVFKNSLFGISISMLITWVLTACILIFILFVPNFTLTHPNFHFTPFEKTYFQILGLVGIVSSIIFTGFLADKIKPHKVCMAFSAAFGFFGFLFFKEFYSNAPSLVNTIILYFLACF-CAGIMNFCPIFMSDVFSARIRFSGISFAYNIAYAITAGFTPQLSSWLNAKAIAVPESLQSYGLSFYILIVSLIAFITSLLMAPIYHKSNTQHEVSPTA
2GFP Chain:A ((14-360))-------VLLVAVGQMAQTIYIPAIADMARDLNVRE--GAVQSVMG-----AYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTV--------------------------LIAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLD--------TMWNWRACYLFLLVLCAGVTFSMARWMPETRPVDAP---RTRLLTSYKTLFGN--SGFNCYLLMLIGGLAGIAAFEACSGVLMGAV--LGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPDW--FGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-FLAGTAGALVGGL-QNIGSGVLASLSAMLPQTGQGSLGLLMTLMGLLIVLCWLPL-------------------------


General information:
TITO was launched using:
RESULT:

Template: 2GFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -298848 for 2936 contacts (-101.8/contact) +
2D Compatibility (PS) -33567 + (NN) 12478 + (LL) 6180
1D Compatibility (HY) -15200 + (ID) 2250
Total energy: -331207.0 ( -112.81 by residue)
QMean score : 0.188

(partial model without unconserved sides chains):
PDB file : Tito_2GFP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GFP-query.scw
PDB file : Tito_Scwrl_2GFP.pdb: