Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKISLNSNKRAWMWWFQGVIFLNPKIVSWLLKAYRMSDNLLHKDIQALIARLKHQDLNLSALEKSLSRLIHDEINLEYLKACGLNFVETSENLITLKNLKTPLKDEVFSFVDLETTGSCPLKHEILEIGAVQVK-------------------GGEIINRFETLVKV-KSVPDYIAELTGITYEDTL--NAPSAHEALQE-LRIFLGN----SVFVAHNA-NFDYNFLGRYFVEKLHCPLL--NLKLCTLDLSKR-A----ILSMRYSLSFLKELLGFG-IEVSHRAYADALASYKLFEICLLNLPSYIKTTMDLIDFSKCANTLIKRPPRAKYQEIPSPFPLFERTKGLLDIMKATS |
| 3MXM Chain:B ((10-216)) | --------------------------------------------------------------------------------------------------------HMQTLIFLDLEATGLPSSRPEVTELCLLAVHRRALENTSISQGHPPPVPRPPRVVDKLSLCIAPGKACSPGASEITGLSKAELEVQGRQRFDDNLAILLRAFLQRQPQPCCLVAHNGDRYDFPLLQTELARLSTPSPLDGTFCVDSIAALKALEQASSP--KSYSLGSIYTRLYWQAPTDSHTAEGDDLTLLSICQWKPQALLQWVDEHARPFSTVKPMYG---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MXM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88923 for 1257 contacts (-70.7/contact) +
2D Compatibility (PS) -18083 + (NN) -5724 + (LL) 11160
1D Compatibility (HY) -6400 + (ID) 1800
Total energy: -109770.0 ( -87.33 by residue)
QMean score : 0.412
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