Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LTKKYLICSDIDGTLLRQDQTVSKKTRDLIQTLEKDGHIFSISTGRMYRSAREVGFQVSSSGHVIASNGSYAAIRDEQLLKTTLEEKAIRSTYDIMSDFDLPLFFFSTNTLFYTKEPPAFFQNLADKSR----LDT---GHNSFSLVSINEKGIFDENMHQFLNAIVVAE-E-DASKLTEVRAALNEANGIRVLSSHHNNLEILPANSDKKTAVEALGKHYNIPRERIITFGDGENDIGMLQYAGTGVAMANASDNVKAAANHLTDTNEADGVYKFLKEFIS |
| 3FZQ Chain:A ((4-271)) | --LYKLLILDIDGTLRDEVYGIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGV-DGYIAGGGNYIQYHGELLYNQSFNQRLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITY---ENNIEEY-K-SQDIHKICLWSNEKVFDEVKDILQDKME--LAQ--RDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKRR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FZQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78278 for 2214 contacts (-35.4/contact) +
2D Compatibility (PS) -27892 + (NN) -6993 + (LL) 1100
1D Compatibility (HY) -15600 + (ID) 2450
Total energy: -130113.0 ( -58.77 by residue)
QMean score : 0.481
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