Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDALFNYKEFVRLSHEGNIKYEKLKVPKHTDLVDTASQRNNHVYLIVEGFVSISM-NPQSNSIYTVLGKGSFVNYYSLFQGNVDDFLFTAISPCTIYKYSFKDLEYFLSMFPENFGFQFFIMRDLARHAFFKSLFAETSSSDKLELSFSNMGKLHGTLYEKDSVILPK-EMRTSTIAAYSNLSKSSFYKQLTLLKEHGKIWKKGKEWVVKDKGLYNYVKVRQFDD |
1FT9 Chain:A ((2-213)) | PPRFNIANVLLSPDGETFFRGFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVGEEREISLFYLTSGDMFCMHS-------GCLVEATERTEVRFAD---IRTFEQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFHDIKQRIAGFFIDHANTTGRQTGVIVSVDFTVEEIANLIGSSRQTTSTALNSLIKEGYISRQGRGHYT----IPNLVRLKAAA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78803 for 1468 contacts (-53.7/contact) +
2D Compatibility (PS) -22520 + (NN) -7386 + (LL) 216
1D Compatibility (HY) -5200 + (ID) 1450
Total energy: -115143.0 ( -78.44 by residue)
QMean score : 0.385
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