Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKSERLNDMMLFLNDKNVFQLSD-IMTKYDISRSTAIRDVKSLEEIGMPI---YSE-RGRNGHYQVLRNRLLSPIVFNID-----EVFAL-------YFSMLT-LKAYETTPFHLSVEKLKTKFERCLSAEKIEMLRK---------TEE-VFSLGYIKHNNQCEFLDVILQFTMEEKVCQINYDKKGIEKTYVV--QFYNIS-SAYGQ-WYVTS-------YNFETKRMQVFRCD-RILELEENHAFEAKKL---TDLKSETDYLYKKKDAINF-EVEIASNGVDLFFK---ENYPSMKLNQEQGRNVIRGFYNRGEEPFIINYLLGFGDKINMVQPDSLKEMLLNELKSLQNHLQKLS |
| 3DSM Chain:A ((1-327)) | --------ASGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRAN-GFKLGDVAQSMVIRDGIGWIVVNNS--HVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPK-----TYEITGYIECPDMDMESGSTEQMVQYGKYVYVNC----------WSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEA--PSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINNDIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYS-PQGKLIDEFYVGIIPGAFCWKLEHHHHH----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DSM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -7910 for 2102 contacts (-3.8/contact) +
2D Compatibility (PS) -29089 + (NN) 11157 + (LL) 3580
1D Compatibility (HY) -18000 + (ID) 2900
Total energy: -43162.0 ( -20.53 by residue)
QMean score : 0.113
|
|
|