Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHRLLGRVMLLLGALGVILTMSFSYVAAAEKPNIDKPVKGLEQTEKAIVADDYNKAKDAFQEDKLWWSENKQVVKEKSYDLAGQIDRQIAEISLGILNNDKQQAMDGITSLHNLLKTYQDG---TYTDNEGNTNITLSSYIAKLTATKKLVDEKEWAKAATQIQDLKTEWL-AVEGDVVSQSQAAYDNTERDLMLLDAYINDP--AKQAKTADVLDGMTEELKPFADVTYTWFDAALIPFREGLEALLIIATLLTYTKRTKTRTAKRWIIGGTAAGLVVSLALGMIVAFWLSALAFGDNNNLINGWAGLIASIMMLYVSYWLHRNSDITRWNNYMEGKSNQALSNGKMISFAFLAFLAILREGLETVVFLIGMVGRMSNFELLMGILAGLGVLLIIAFVMLRYSVHIPVKPFFMISSAIVFYLCFKFMGSGIHSLQLAGVIPTSVEDYLPSIPALSIYPSWYSFLPQVLLVIFGLTILIKQQIKKKS |
| 1EQ1 Chain:A ((41-162)) | ------------------------------------------------------------------------------------------------------KALKDGSDSVLQQLSAFSSSLQGAISDANGKAKEALEQARQNVEKTAEELRKAHPDVEK-EANAFKDKLQAAVQ-TTVQESQKLAKEVASNMEETNKKLAPKIKQAYDDFVKHAEEVQKKLHEA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1EQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 13399 for 853 contacts (15.7/contact) +
2D Compatibility (PS) -11860 + (NN) -1125 + (LL) 30484
1D Compatibility (HY) 1600 + (ID) 750
Total energy: 31748.0 ( 37.22 by residue)
QMean score : 0.280
|
|
|