Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKLLRKPLNERIAPGVTLVQDINQGNSPLSYVGFRLIELEEDAVYQETL-DGLECCIVALTGKISVSEGD--HV---FSEIGTRANVFEKIPTDSVFISGGRAFQVKADA-EKARVALCYSPADRNLPTTLIKASDNSIEQRGKYQNKRLVHNILPDVSEVASSLLVVEVYTDGGNFSSYPPHKHDHDNLPAESLLEESYYHEINPKQGFIFQRVYTDDRALDETMAVEHQNAVIVPEGYHPVGVPDGYDSYYLNVMAGPKRVWEFHNDPDHEWILERD |
| 2VQA Chain:A ((49-133)) | -----------------------------SKGMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIA-DV-------DK--GGLWYFPRGWGHSIEGIGPDTAKFLLVFNDG------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45032 for 496 contacts (-90.8/contact) +
2D Compatibility (PS) -8372 + (NN) -476 + (LL) 9740
1D Compatibility (HY) -3200 + (ID) 400
Total energy: -47740.0 ( -96.25 by residue)
QMean score : 0.477
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