Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKQSADKRRIEK-NDKPFFYLADTVWSAFTNIDLTDWAYYLKVRKEQGFNVLQINILPQWDRSVLKKIQEPFGINEGFFDLKAKNEAYFKHAEKMLEMAVNQGFTPALVLLWCNYIPETWGAKFGTSPLFRKEDIKPYTEMMLEHFEQF-EP-IYIISGDTDFP--TETVTDYYLEALETVSKKAPHALKVLHICGRLKDIP-------ENLQTHPALDLYFYQSGHNSEHQSMAYTLAEHF--SQLEPIKPVINSEPCYELMGYSRQKYGRFSREDVRKAAWQSVLSGAIAGISYGAHGIWSWHEEGSTFGSALGEGFVSPFNWRQALHFEGATDYAFLKSFILANDLTTLAPINLVLNQTPEIRAAETEKVVIIYVPSNVPIYLKGQFVSLDDYAIDLEQGKKVSLAKILHEEKTEIQMTPFLKDSLYVIHK |
| 2WHL Chain:A ((3-223)) | ----SVDGNTLYDANGQPFVMRGINHGHAWYK---DTASTAIPAIAEQGANTIRIVLSDG----------------------GQWEKDDIDTIREVIELAEQNKMVAVVEVHDATGRDS--------R--SDLNRAVDYWIEMKDALIGKEDTVIINIANEWYGSWDGSAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQSIHDYGQDVFNADP--LKNTMFSIHMYEYAGGDANTVRSNIDRVIDQDLALVIGEFGHR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WHL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62366 for 1687 contacts (-37.0/contact) +
2D Compatibility (PS) -22099 + (NN) -10905 + (LL) 15308
1D Compatibility (HY) 2800 + (ID) 1250
Total energy: -78512.0 ( -46.54 by residue)
QMean score : 0.279
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