Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEWSEVEVHTTNEAVEPVANVLTEFGAAGVSIEDVADFLREREDKFGEIYALRREDYPEDGVIIKAYFLKTTEFVEQIPEIEQTLKNLSTFDIPLGKFQFVVNDVDDEEWATAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPTTQLCIRALSNYLQPGDEVIDVGTGSGVLSIASAKLGAKSILATDLDEIATRAAEENITLNKTEHIITVKQNNLLQDINKTNVDIVVANILAEVILLFPEDVYKALKPGGVFIASGIIEDKAKVVEEALKNAGLIIEKMEQQGDWVAIISKRGVE |
| 3CJT Chain:I ((41-254)) | ----------------------------------------------------------------------------------------APVDLP---YEGVWEEVGDEDWLEAWRRDLKPALAPPFVVLAP-WHTW--EGAEIPLVIEPGMAFGTGHAETTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGGKA-LGVDIDPMVLPQAEANAKRNGVRPRFL--EGSLEAALPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEAAEGEWVLLAYGR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CJT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97738 for 1771 contacts (-55.2/contact) +
2D Compatibility (PS) -23206 + (NN) -13273 + (LL) 7984
1D Compatibility (HY) -13200 + (ID) 3900
Total energy: -143333.0 ( -80.93 by residue)
QMean score : 0.539
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