Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPNMEPTTKEIKEQKIYQEMGLTDSEYELVCSILGREPNYTETGLFSVMWSEHCSYKNSKPVLRKFPT------EGKQVLQGP--GEGAGIVDIGDGLGVAFKVESHNHPSYVEPYQGAATGVGGIIRDVFSMGARPIAMLNSLRFGELDTPHAKYLVSEVVAGIAGYGNSIGIPTVGGEIQFDPCYTKNPLVNAMCVGLIEAKDIQKGQAKGIGNPVMYVGAKTGRDGIHGATFASVEFSEEGEQQRSAVQVGDPFMEKLLLEACLDVIRDHSDILVGIQDMGAAGLVSSSSEMASKAGAGLELIMDDVPQRELHMT----------------PYEMLLSE-------------SQERMLLCVKKGHVEEIQALFERYGLEAVVIGQVTDDKMYKIIHHGEVVANVPVDALAEDAPVYHKPSKEPTRYQAFQEEEAFVPAMDDVVGVWKELLAQPTIASKRHIYEQYDYQVRTDTAVVPGSDAAIVRVRGTEKAIAMTTDCNSRYLYLDPEVGGAIAVAEAARNIVCSGGKPLAITDGLNFGNPEKPEIFWEIEKAADGISAACLELDTPVISGNVSLYNETDGTGIYPTPVIGMVGLVEDLAHITTQDFKNSGDVIFLIGETKAEYSGSELQKLQQGKISGRAPELDLVTEKKYQQLLLTAIQEGLVASSHDLAEGGFGVALAEATFKAGLGAEVEVPFALNQLFSESQSRFLVSVKPENEAAFAQLMELEKVYRLGVVTEDDTIRVKHKEDQVTAKTTELRSIWEGAIPCLLK |
3U0O Chain:A ((29-339)) | -----------------------------------------------------------------ILHSEQAKFVDPNLLVGNETRDDAAVYDLGNGTSVISTTDF-FMPIVDNPFDFGRIAATNAISDIFAMGGKPIMAIAILGWPINK--LSPEIAREVTEGGRYACRQAGIALAGGHSIDAP----EPIFGLAVTGIVPTERVKKNSTAQAGCKLFLTK----PLGIGVLTTAEK---KSLL-KPEHQGLATEVMCR-MNIAGASFAN--IEGVKAMTDVTGFGLLGHLSEMCQGAGVQARVDYEAIPKLPGVEEYIKLGAVPGGTERNFASYGHLMGEMPREVRDLLCDPQTSGGLLLAVMPEAENEVKATAAEFGIELTAIGELVPARG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100372 for 2310 contacts (-43.5/contact) +
2D Compatibility (PS) -27763 + (NN) 1070 + (LL) 31824
1D Compatibility (HY) -5600 + (ID) 2800
Total energy: -103641.0 ( -44.87 by residue)
QMean score : 0.425
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