Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LLSNKQTVLCIEEMAKMFPAAH---CELVHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYHSPEDYLAVPLEELMEDIRSIGLYRNKAKNIQGLSEKILTEFNGEVPKTHAELESLPGVGRKTANVVLSVGFGVPAIAVDTHVERISKRLGICRWKD----SVVEVEETLKRKLPKELWSDAHHYMIFFGRYHCKARNPECPTCPLLYLCREGKKQAKVRGFDG
3FSP Chain:A ((11-223))
----FPAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYYS-RVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVDGNVMRVLSRLFLVTDDIAKPSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEG--------
General information:
TITO was launched using:
RESULT:
Template:
3FSP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106469 for 1640 contacts (-64.9/contact) +
2D Compatibility (PS) -21762 + (NN) -12380 + (LL) 376
1D Compatibility (HY) -10800 + (ID) 2200
Total energy: -153235.0 ( -93.44 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_3FSP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FSP-query.scw
PDB file :
Tito_Scwrl_3FSP.pdb
: