Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MKVIRKFCTYQKLRVKAFTL---------------------LECLVALVTITG-ALLVYQGLT--------KLLAQQIVVMSSSSQSEWVLLTQQLNA---EFEGAHLEYLRQNKLYLRKQDKIVTFG---KSNKDDFRKTGYDGRGYQPMVYGLDNCQMSQTKSMVKLVFYFKDGLKRTFYYDFKEET-------------------- |
| 4O6Y Chain:A ((10-219)) | PIFMVVRVLGFIIAALVLTWTVHYRGGLALSSDNKDHIFNVHPVMMVIGLILFNGEAMLAYKSVQGTKNLKKLVHLTLQLTAFILSLIGVWAALKFHIDKGIENFYSLHSWLGLACLFLFAFQWAAGFVTYWYPGGSRNSRASLMPWHVFLGISI-YALALVTATTGILEKVTFLQVNQVITRYSTEAMLVNTMGVLILILGGFVILGVVT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22853 for 970 contacts (-23.6/contact) +
2D Compatibility (PS) -16148 + (NN) -4780 + (LL) -172
1D Compatibility (HY) -8800 + (ID) 1100
Total energy: -53853.0 ( -55.52 by residue)
QMean score : 0.101
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