Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLMVLLFQRLGIIMILAFLLVNNSYFRQLIEERSKRETVVLVIIFGLFVIISNITGIEIKGDRSLVERPFLTTISHSDSLANTRTLVITTASLVGGPLVGSIVGFIGGVHRFFQGSFSGSFYIVSSVLVGIVSGKIGDKLKENHLYPSTSQVILISIIAESIQMLFVGIFTGWELVKMIVIPMMILNSLGSTLFLAILKTYLSNESQLRAVQTRDVLELTRQTLPYLRQGLTPQSARSVCEIIKRHTNFDAVGLTDRSNVLAHIGVGHDHHIAGQPVKTDLSKSVIFDGEPRIAQDKAAISCPDHNCQLNSAIVVPLKINDKTVGALKMYFAGDKTMSEVEENLVLGLAQIFSGQLAMGITEEQNKLASMAEIKALQAQINPHFFFNAINTISALIRIDSDKARYALMQLSTFFRTSLQGGQDREVTLEQEKSHVDAYMNVEKLRFPDKYQLSYDISAPEKMKLPPFGLQVLVENAVRHAFKERKTDNHILVQIKP--DGHYYCVSVSDNGQGISDTIIDKLGQETVAE-SKGTGTALVNLNNRLNLLYGSVSCLHFSSD-KNGTKVWYRIPNRIREDEHENFNS |
| 3SL2 Chain:A ((40-153)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DQDKITQVLDNIISNALKYS----PEGGHVTFSIDVNEEEELLYISVKDEGIGIPKKDVEKVFDRFYRVDLGGTGLGLAIAKEMVQAHGGD---IWADSIEGKGTTITFTLPYKE---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28611 for 697 contacts (-41.0/contact) +
2D Compatibility (PS) -11192 + (NN) -4700 + (LL) 36992
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -11761.0 ( -16.87 by residue)
QMean score : 0.475
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