Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVTVEKNRAVTFQANKELVSEAMTVLNKKNLTLSSALRLFLQNVVVTNEVDLLTEEELEKEKLFKQFQAEISKNIEDVRQGKFYTSEEVRAELGL
1IRQ Chain:A ((24-69))
-----IMGDKTVRVRADLHHIIKIETAKNGGNVKEVMDQALEEYIRKYLPDKL------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1IRQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16276 for 202 contacts (-80.6/contact) +
2D Compatibility (PS) -4991 + (NN) -3475 + (LL) 4836
1D Compatibility (HY) 1200 + (ID) 250
Total energy: -18956.0 ( -93.84 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_1IRQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IRQ-query.scw
PDB file :
Tito_Scwrl_1IRQ.pdb
: