Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MNQFILTGGWSWYNNLVSQVPAGKLFSWKAVLDAIPSILERLPITLLLTVA--------GALFGLILAL----------IFAVVKINRVKILYPIQALFVSFLRGTP-----------ILVQLMLSYYGIPLFLKFL---NQKYGF--DWNINAIPASVFAITAF--------------AFNEAAYTSETIRAAILSV--DQGEI-------EAARSLGMTSA----------QVYRRVII---------PNAAVVATPTLI-NTLIGLTKGTS-------------LAFNAGIV---EMFAQAQIMGGSDYR-YFERYISVALVYWAVSFLIEQLGNAIER---KMAIKAPRHLTDEIPGGVR------------------------ |
| 4KKI Chain:A ((24-434)) | EICEVSEENYIRLKPLLNTMIQSNYNRGTS--AVNVVLSLKLVGIQIQTLMQKMIQQIKYNVKSRLSDVSSGELALIILALGVCRNAEENLIYDYHLIDKLENKFQAEIENMEAHNGTPLTNYYQLSLDVLALCLFNGNYSTAEVVNHFTPENKNYYFGSQFSVDTGAMAVLALTCVKKSLINGQIKADEGSLKNISIYTKSLVEKILSEKKENGLIGNTFSTGEAMQALFVSSDYYNENDWNCQQTLNTVLTEISQGAFSNPNAAAQVLPALMGKTFLDINKDSSCVSASGNFNIQSYISVNYSVRINETYFTNVTVLNGSVFLSVMEKAQKMNDTIFGFTMEERSWGPYITCIQGLCANNNDRTYWELLSGGEPLSQGAGSYVVRNGENLEVRWSKYL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165254 for 1836 contacts (-90.0/contact) +
2D Compatibility (PS) -27762 + (NN) -6510 + (LL) 312
1D Compatibility (HY) -16400 + (ID) 3000
Total energy: -218614.0 ( -119.07 by residue)
QMean score : 0.166
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