Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKKHHYFLAFFYGSVIIFAICFVIIDSLGVNLVHLYQTSRLWLIEQLIFSIFFLSLAVTILLLLTWFLLDDNSKRQINHNLRRILNNQSINVTDDGTEISTNIQRLSKKMNLMTASLQSKENSRILKSQEIVKQERKRIARDLHDTVSQDLFAASMVLSGIAQNVSQL--DVDQVGSQLLAVEEMLQHAQNDLRILLLHLRPVELENKTLSEGFKMILKELTDKSDIEVVYHESILTLPKKIEDNIFRIGQEFISNTLKHSQASRLEVYLNQTENELQLKMIDNGIGFDMDSVYDL--------------SYGLKNIEDRVEDLAGNLQLLSQPDKGVAMDIRLPLVNQNEDKNG--- |
| 1JM6 Chain:A ((11-374)) | ASLAGAPKYIEHFSKFSPSPLSMKQFLDFGAC----EKTSFTFLRQELPVRLANIMKEINLLP----DRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQGVLEYDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDPKHIGSIDPNCSVSDVVKDAYDMAKLLCDKYY-MASPDLEIQEVNATNATQPIHMVYVPSHLYHMLFELFKNAMRATVES-----------HESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPTPAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLPVY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14628 for 2511 contacts (-5.8/contact) +
2D Compatibility (PS) -33288 + (NN) -2080 + (LL) 2244
1D Compatibility (HY) -1600 + (ID) 1900
Total energy: -51252.0 ( -20.41 by residue)
QMean score : 0.293
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