Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MALFSKKDKYIRISPNKALGSSDKRSLPEVPDELFAKCPSCKHMIYQKDLG-L----AKICPACSYNFRISAQERLLLTVDEDSFEELFTGIETKDPLNFPNYREKLAATRQKTNLDEAVVTGLAKIKGQTTALAIMDSHFIMASMGTVVGEKLTRLFELATEKKLPIVIFTASGGARMQEGIMSLMQMAKVSAAVKRHSNQGLFYLTILTDPTTGGVTASFAMEGDIILAEPQ-ALVGFAGRRVIETTVREDLP-EGFQKAE-FLLEHGFVDAIINRT-ELRDCIAQLIAFHGNEVGHE |
3N6R Chain:B ((26-271)) | -----------------------------------------LEQLEDRRAAARLGGGQKRIDAQHGRGKLTARERVDLLLDEGSFEEFDMFVTH-RCTDFNMQ--------DQKPAGDGVVTGWGTINGRVVYVFSQDFTVLGGSVSETHSKKICKIMDMAMQNGAPVIGINDSGGARIQEGVDSLAGYGEVFQRNIM-ASGVVPQISMIMGPCAGGAVY-SPAMTDFIFMVKDSSYMFVTGPDVVKTVTNEQVSAEELGGATTHTRKSSVADAAFENDVEALAEVRRLVDFLPLNNREK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N6R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119347 for 1977 contacts (-60.4/contact) +
2D Compatibility (PS) -26222 + (NN) -14985 + (LL) 2960
1D Compatibility (HY) -5200 + (ID) 2550
Total energy: -165344.0 ( -83.63 by residue)
QMean score : 0.401
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