Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQSLNKTVEFQTTGVSYLGMGNKVGKFLVGDQALEFYNDKNVNDYIQI---------------PWTSINQIGANVSRKKIS---RHFEVFTDQ-GKFLFASKDSGTILKHARRHIGDDKVVKLPTLIQTILKIFKFKK
1T77 Chain:A ((2077-2170))
-------PVSLSTPAQLVAPSVVVKGTLSVTSSELYFEVDEEDPNFKKIDPKILAYTEGLHGKWLFTEIRSI----FSRRYLLQNTALEIFMANRVAVMFNFPDP----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1T77.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15807 for 432 contacts (-36.6/contact) +
2D Compatibility (PS) -7991 + (NN) -1508 + (LL) 3580
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -26876.0 ( -62.21 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_1T77.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T77-query.scw
PDB file :
Tito_Scwrl_1T77.pdb
: