Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQAETLTSLEQVLKQIKYSLDSYYSFCVKKGFVLKVIPVRENIEEVSYLLNMIESQKDTE-ISTYYVDKLSKQLKEFVKKLNSWEVKPLFTSEQLSKLTTYSTFLENKE
3VR4 Chain:A ((517-590))
----DTFTSREKQFNMLKVILT-FGKEARK--ALSLGAYFNEIMEGTVAVRERISRSKYIPEEELAKISSINEEIKETIQLIVSE-------------------------
General information:
TITO was launched using:
RESULT:
Template:
3VR4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20785 for 449 contacts (-46.3/contact) +
2D Compatibility (PS) -7603 + (NN) -1059 + (LL) 2316
1D Compatibility (HY) 1200 + (ID) 650
Total energy: -26581.0 ( -59.20 by residue)
QMean score : 0.300
(partial model without unconserved sides chains):
PDB file :
Tito_3VR4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VR4-query.scw
PDB file :
Tito_Scwrl_3VR4.pdb
: