Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------MGSKATFHIGTIIKTHYLFNFFRKQGIVAM-TQEEIDQMIEDWISNGFPDELKRLIPD-----EE
2JVE Chain:A ((18-88))
MALKCFTRNGDDRTVTTCAEEQTRCLFVQLPYSEIQECKTVQQCAEVLEEVTAIGYP--AKCCCEDLCNRSEQ
General information:
TITO was launched using:
RESULT:
Template:
2JVE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24132 for 296 contacts (-81.5/contact) +
2D Compatibility (PS) -6217 + (NN) 1168 + (LL) 28
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -32203.0 ( -108.79 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_2JVE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JVE-query.scw
PDB file :
Tito_Scwrl_2JVE.pdb
: