Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFIPFKKSNKCVVTDELFLEVTWEDGKPPEDDSELLGIIEGLEQQYLDSFQHSIEESLPYMTFQQAELL----FQSLKDAYGHFQLKKVAICHLEGKQAVSEGEVFASPFIIDSRYQNLLLPLIQSIMIGPDFQSYTYQEKREYFVNQIYPAYKVSLGIQESALPLFPEEGEQIPLDNTFVANRRVASIPTTSSEPRKPNSSFSLKKVYLLMGFLATLAAGAMVSSVSLHAELSKQQEQVNYLYQEWKDIQNLSDKEHQIDVFSRYFLPNYYSGKKENLSDFLSDGDAKYTVPKEGSLQSVILEKVTYDAKTKHYQLTYVLTIKAKEQLTSVRLEFEVKEQPSRKYGYVVTSEPKETPYLMKN |
2XQH Chain:A ((23-280)) | --------SDA--KASGEFSVAVGNGARATEKASTAVG-----SWAAADGKQSTALGVGTYAYANASTALGSVAFVDNTATYGTAAGNRAKV-----DKDATEGTALGAKATVTNKN---------SVALGAN--SVTTRD------NEVYIGYKTGTE------------------SDKTYGTRVLGGLSDGTRNSDAAT-----------VGQLNRKVGGVYDDVKARITVESEKQKK--YTDQKTSEVNEKVEARTTVGV----------------------DSDGKLT-RAEGATKTIAVNDGLVALSGRTDRIDYAVGAIDGRVTRNTQSIEKNSKAIAANTRT--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XQH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18397 for 1693 contacts (10.9/contact) +
2D Compatibility (PS) -26957 + (NN) -13598 + (LL) 7968
1D Compatibility (HY) 7600 + (ID) 1900
Total energy: -8490.0 ( -5.01 by residue)
QMean score : 0.123
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