Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNEKVFRDPVHTYIHVNNQVIYDLINTKEFQRLRRIKQTSTTSFTFHGAEHSRFSHCLGVYELARKVTEIFDEHYSDLWNKNESLLTMAAALLHDIGHGAYSHTFERLFNTD--HEAYTQEIITNPTTEINAILRKVAPDFPDKVASVINHSYPN----KQVVQLISSQIDCDRMDYLLRDSYYTAASYGQFDLTRILRVIRPTDSGIAFARNGMHAVEDYIVSRFQMYMQVYFHPASRAMELLLQNLLKRARFLFDTHRDFFEQTSPNLIPFFTDQYDLQDYLALDDGVMNTYFQSWMQADDNILADLANRFINRKVFKSITFEESDKENLVKMKELVSQVGFDPDYYTGVHANFDLPYDVYRPEHSNPRTEIQIIQKNGQLAELSSLSPIVKALTGSNYGDQRFYFPKEMLTLDSLFSSTKEEFQSYITNEHLTLTKDNSHS |
2HEK Chain:B ((3-239)) | ---KEFSDPLYGFVRVGEAGL-RLIDSFPFQRLRYVKQLGLAYLVFPSAQHTRFEHSLGVYHITERICE-------SLKVKEKELVKLAG-LLHDLGHPPFSHTTEVLLPRERSHEDFTERVIKE--TEIYEILKQDYSHEDIERLVRITLGKPEDEEEKLLSEIITGEFGSDRMDYLRRDAYFCGVSYGFFDYDRLISTLRVYENKVVVDESGLRALENFLISRYFMYVQVYFHKVVRILSIHLVEFLKKLISQEDFTDINNFLRLNDAFVISELFKRKAFREDFERIFQRKHFKTLLSTENYEKFSETKERLLEKFPQEKVRFDEVEKEVYGGNIYVLSSEGLKKAHELSPLIASLKPIKLYRIYVDRQLWEKARSELK--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HEK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119330 for 1862 contacts (-64.1/contact) +
2D Compatibility (PS) -24624 + (NN) -8493 + (LL) 5180
1D Compatibility (HY) -22000 + (ID) 4250
Total energy: -173517.0 ( -93.19 by residue)
QMean score : 0.273
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