Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALIEMSGVTKKYRRSTTALRNLNLSIQQGEFVYLVGPSGAGKSSLIRLLYREEKLSSGRLKVGEFNLNKLKRRQIPILRRSIGVVFQDYKLLPTKTVYENVAFAMQVIGAKRRHIKKRVPEVLELVGLKHKMRSFPTQLSGGEQQRVAIARAIVNNPKLLIADEPTGNLDP----EIAWEIMHLLERINLQGTTVLMATHNSQIVNTLRHRVIEIEAGSVIRDEEKGEYGYHD
4KI0 Chain:B ((2-212))
-ASVQLQNVTKAWGEVVVS-KDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMND-----TPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL---GRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYP
General information:
TITO was launched using:
RESULT:
Template:
4KI0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148757 for 1643 contacts (-90.5/contact) +
2D Compatibility (PS) -22448 + (NN) -9222 + (LL) 1160
1D Compatibility (HY) -18800 + (ID) 4150
Total energy: -202217.0 ( -123.08 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_4KI0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KI0-query.scw
PDB file :
Tito_Scwrl_4KI0.pdb
: