Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRRRIKPIVVAVFFSLFGLLLIIGHLHSTNTLKKELVEAKKTIPSVKASKVPQKSTSSKDKEFVLKPIIDVSGWQLPKEIDYDTLS--KNI-SCVVIRVFGGSKISKTNNAAYTTGIDKSFKTHIKEFQKRNIPV-AVYSYALGSS-VKEMKEEAQIFYKNAAPYK---PTFYWIDVEEETMSNMNKGVQAFRKELKRLGAKNVGIYIGTYF--MT-----EQGIS--VKGFDAVWIPTYGSDSGYY----EAAPQ---TELKYDLHQYTSQGYLPGFNQPLDLNQIAVNKDKKKTYEKLFGKVKE |
| 1SFS Chain:A ((28-229)) | ----------------------------------------------------------------GIWGVDSAQVVT--DQLFQCVRTELGYPKFWGRYLSEVPNV-----------SEGLTRDEIVRIRNYGVKVLPIYNAFREAVGYANGQVAARNAVFHARRLGIPKNKLLFANIEDFFAV-DAAWIAAWVETLYPTGY-RPGLYADPTKGDFAAAYCEAVSRNNQVAVQAVIWSAAPRPGTTKEQKAPRYQPAAPPCSANVWVWQYGRDAEVCPVDTNLADRRLLDFLY-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35523 for 1376 contacts (-25.8/contact) +
2D Compatibility (PS) -19411 + (NN) -5553 + (LL) 6420
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -56917.0 ( -41.36 by residue)
QMean score : 0.288
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