Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDAKFDFAKLLVYKAGQFIKSEMQNT--FDVEEKSRFDDLVTSLDKKTQKLLIQEIIQHYPDDNILAEEDDV-RSPIAQGNVWVLDPIDGTVNFIVQKDNFAVMLAYYEEGVGQFGIIYDVM-ADILYSGGGHFDVYANDKKIVPFQECPLERCLLGVNSAMYAE-----NDCGIAHLASETLGVRIYGGAGISMAKVMQGKLLAYFSY-IQPWDYAAAKIMGETLGFTLLTLDGEEPNYSTRQKVMFL-PKSKLNLIQSYLTKK
2QFL Chain:A ((1-259))
MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQ-KGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEESGELEG-TDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNEL-FTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAKQYATTYINIVGKLFNECADFRATGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTGGHN-YML-TGNIVAGNPRVVKAMLANMRDE
General information:
TITO was launched using:
RESULT:
Template:
2QFL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -177373 for 2182 contacts (-81.3/contact) +
2D Compatibility (PS) -26571 + (NN) -11273 + (LL) 120
1D Compatibility (HY) -9600 + (ID) 2900
Total energy: -227597.0 ( -104.31 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_2QFL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QFL-query.scw
PDB file :
Tito_Scwrl_2QFL.pdb
: