Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATIKEIKAILETIVDLKDKRWQEYQTDSRAGVQKAILQRKKNIQSDLDEEARLEQMLVYEKKLYIEHINLIAGIDEVGRGPLAGPVVAAAVILPPN----CKIKHLNDSKKIPKKKHQEIYQNILDQALAVGIGIQDSQCIDD----INIYEATKHAMIDAVSHLSV------APEHLLIDAMVLD--------------------LSIPQTKIIKGDANSLSIAAASIVAKVTRDKIMSDYDSTYPGYAFSKNAGYGTK-EHLEGL----QKYG-ITPIHRKSFEPIKSML |
| 1EKE Chain:A ((2-219)) | ----------------------------------------------------------------------IIIGIDEAGRGPVLGPMVVCAFAIEKEREEELKKLGVK---ELTKNKRAYLKKLLENL-GYVEKRILEAEEINQLMNSINLNDIEINAFSKVAKNLIEKLNIRDDEIEIYIDACSTNTKKFEDSFKDKIEDIIKERNLNIKIIAEHKADAKYPVVSAASIIAKAERDEIIDYYKKIYGDIG----SGYPSDPKTIKFLEDYFKKHKKLPDIARTHWKTCKRIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EKE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103414 for 1367 contacts (-75.7/contact) +
2D Compatibility (PS) -18867 + (NN) -5194 + (LL) 7160
1D Compatibility (HY) -9600 + (ID) 2500
Total energy: -132415.0 ( -96.87 by residue)
QMean score : 0.488
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