Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYLIEPIRNGKRITDGAIALAMQVYILQNVFLD-DDILFPYYCDPKVEIGKFQNAVIETNQEYLKEHDIPVVRRDTGGGAVYVDSGAVNICYLMKDHG---QFGDFKRAYEPAIKALKTLGASSVEM-RGRNDLIIDG---KKVSGAAMTIVNGRIYGGYSLLLDVDFDAMEKVLNPNRKKIESKGIKSVRSRVGDIRSHLSEDYRHITTDQFKDLMVCQLLHIDHIDQAKRYHLTEKDWAAIDALADEKYKNWDWNYGNSPQYSYHRDARFPSGTYDFHLEIEKGIITNCRIYGDFFSSKDISDIENLLIGCPMKEELVLEKLSTVSLEDYFGQTSPEEIKAVLFP |
| 1W66 Chain:A ((18-218)) | ---------QLGTVDYRTAWQLQRELADARVAGGADTLLLLEHPAVYTAGRRTETH-E-----RPIDGTPVVDTDRGGKITWHGPGQLVGYPIIGLAEPLDVVNYVRRLEESLIQVCADLGLHA-GRVDGRSGVWLPGRPARKVAAIGVRVSRATTLHGFALNCDCDLAAFTAIV-PC--GIS-------DAAVTSLSAELGR---TVTVDEVRATVAAAVCAALDG-VLP-------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77851 for 1555 contacts (-50.1/contact) +
2D Compatibility (PS) -20498 + (NN) -8560 + (LL) 8868
1D Compatibility (HY) -6000 + (ID) 1750
Total energy: -105791.0 ( -68.03 by residue)
QMean score : 0.518
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