Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIDTFKVKWFKRGMSLLVLILVFFLGLGFGQMGNSSQSKDRPKQTATKKTRTNTITQTQVKEFLVAYYTKKDLEENRNRYKDYMTEGLYNATISEENKAQNQAYRGFVVNF---EFQDANIYIDQVHKQVICEVTYTNDLLQKKNNKDGAQIGVVNHTTIQLAYTKLNGKYLIN----QMSTILLTDSANPSEETESYGA---IAPSNTKD |
1KHH Chain:A ((6-198)) | ---RWETPYMHSLAAAAASRGGRVLEVGFGM------------AIAASRVQQAPIKEHWIIECNDGVFQRLQNWALKQPHKVVPLKGLWEEVAPT---LPDGHFDGILYDTYPLSEETWHTHQFNFIKTHAFRLLKPGGILTYCNLTSWGELMKSKYTDITAMFEETQVPALLEAGFQRENICTEVMALVPPADCRYYAFPQMITPLVTKH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1KHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -11571 for 1485 contacts (-7.8/contact) +
2D Compatibility (PS) -18391 + (NN) 3638 + (LL) 428
1D Compatibility (HY) 0 + (ID) 1150
Total energy: -27046.0 ( -18.21 by residue)
QMean score : 0.084
|
|
|