Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNKGLIATLILLTILVVGELFYNKSEKHLNLSEKQVVKIGILQYV-PHDALDAIEKGVEDGLAQEGYKGKKVKLTVLNAEADQSKIQAMSKQLVNHHNDILIGIATP--S----AQGLAASTKDTPIIMGAVSDPLGAKLVTNMKKPTTNVTGLSNVVPTKQTVQLIKDITPNVKRIGILYAS-SEDNSVSQVTEFTKYAQKA-GLEVLKYSV--PSTNEIKTSMSVM---TKKVDAVFVPQDNTIASAFRTVIVAANQANIPVYSSVDTM-----VEQG-SIASVAQSQYGLGLETAKQAIKVLRGKPVKDVPVKVIDTGKPSLNLKAAKHLGIKIPKKIMKQAEITVKVDD |
| 2IOY Chain:A ((2-275)) | -------------------------------------KTIGLVISTLNNPFFVTLKNGAEEKAKELGYK-----IIVEDSQNDSSKELSNVEDLIQQKVDVLLINPVDSDAVVTAIKEANS--KNIPVITIDRSANGG---------DVVCHIASDNVKGGEMAAEFIAKALKGKGNVVELEGIPGASAARDRGKGFDEAIAKYPDIKIVAKQAADFDRSKGLSVMENILQAQPKIDAVFAQNDEMALGAIKAIEAANR-QGIIVVGFDGTEDALKAIKEGKMAATIAQQPALMGSLGVEMADKYLKGEKIPN----FIPAELKLITKENVQ---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IOY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69332 for 2231 contacts (-31.1/contact) +
2D Compatibility (PS) -27222 + (NN) -10074 + (LL) 6884
1D Compatibility (HY) -1600 + (ID) 2350
Total energy: -103694.0 ( -46.48 by residue)
QMean score : 0.471
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