Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIDFRAEVDKRKDALMDDLINLLRINSERDDSQADAEHPFGPGPVKALEFFLEMAERDGYETKNVDNYAGHFTFGQGEEELGIFGHLDVVPAGSGWDTDPYEPVIK-DNRLYARGSSDDKGPTMACYYALKIIKELGLPTSKKVRFVVGTDEESGWGDMDYYFEHVGLPKPDFGFSPDAEFPIINGEKGNITGYLHFSGENKGAVRLHSFSGGLRENMVPESAT----ARFTSHLDQTTLGASLADFASKHNL---------KAELSVEDEQYTATVYGKSAHGSTPQEGVNGATYLALYLSQFDFEGPARAFLDVTANIIHEDFSGEKLGVAYEDDCMGPLSMNAGVFQFDETN--DDNTIALNFRYPQGTDAKTIQTKLEKLNGVEKVTLSD-HEHTPHYVPMDDELVSTLLAVYEKQTGLKGHEQVIGGGTFGRLLERGVAYGAMFPGDENTMHQANEYMPLENIFRSAAIYAEAIYELIK |
| 1LFW Chain:A ((1-466)) | MDLNFKELAEAKKDAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENFANYAGRVNFGAGDKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKIDFVLGTNEETNWVGIDYYLKHE--PTPDIVFSPDAEYPIINGEQGIFTLEFSFKNDDTK---GDYVLDKFKAGIATNVTPQVTRATI-SGPDL---------EAVKLAYESFLADKELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLDQYAFAGRDKNFLHFLAEVEHEDFYGKKLGIFHHDDLMGDLASSPSMF---DYEHAGKASLLNNVRYPQGTDPDTMIKQVLDKFSG-ILDVTYNGFEEPHYVPGSDPMVQTLLKVYEKQTGKPGHEVVIGGGTYGRLFERGVAFGAQPENGPMVMHAANEFMMLDDLILSIAIYAEAIYELTK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118239 for 4220 contacts (-28.0/contact) +
2D Compatibility (PS) -48014 + (NN) -22730 + (LL) 1240
1D Compatibility (HY) -36400 + (ID) 10050
Total energy: -234193.0 ( -55.50 by residue)
QMean score : 0.532
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