Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYQRIRDLREDHDFTQRYVAEVLSFSHTNYAKIERGEVVLTADVLIKLSKLYNVSTDYILGLTDYPHKINFKK
1R69 Chain:A ((3-63))
-SSRVKSKRIQLGLNQAELAQKVGTTQQSIEQLENGKT-KRPRFLPELASALGVSVDWLLNGT----------
General information:
TITO was launched using:
RESULT:
Template:
1R69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40497 for 410 contacts (-98.8/contact) +
2D Compatibility (PS) -6502 + (NN) 202 + (LL) 768
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -48279.0 ( -117.75 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_1R69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R69-query.scw
PDB file :
Tito_Scwrl_1R69.pdb
: