Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METNIYGDYGRYLPLILEDFSQRIQ-LENDKAKVETGYKLYEHIIGRIKTSDSMIEKCRRKQLPVTVDSALKAIRDSIGVRIICGFVNDIYQIVERIKSFDDCRIVVEKDYIQHVKPNGYRSYHVILEIDTPYPDCLGNSEGKYYIEIQLRTIAQDSWASLEHQMKYKHDIENPERIVRELKRCADEMASVDLTMQTIRQLIESGTKKE |
3ZC4 Chain:A ((8-164)) | ----------PVAETISKRFWTLIKML------------RFYVVLRRFGYIDPLIYSIDPKQIKDVLSEALREFVSYTSSSSSRSIVIY-DDPKNPVTAQAPCLVVAKRDEIPQNFPSIYR--YTIYKIDKSSEYCISP------------LVVNDKYATL---------ITPNESVIKEFFDKLDS------NIQYARVLASLAVGGE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50636 for 1143 contacts (-44.3/contact) +
2D Compatibility (PS) -15888 + (NN) 418 + (LL) 3412
1D Compatibility (HY) -6400 + (ID) 1700
Total energy: -70794.0 ( -61.94 by residue)
QMean score : 0.173
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