Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKNTWKKLLVSTAALSVVAGGAIAATHSNSVDAASKTTIKLWVPTD-SKASYKAIVKKFEKENKGVTVKMIESNDSKAQENVKKDP--SKAADVFSLPHDQLGQLVESGVIQEIPEQYSKEIAKNDTKQSLTGAQYKGKTYAFPFGIESQVLYYNKTKLTADDVKSYETITSKGKFGQ-----QLKA--ANSYVTGPLFLSVGDTLFGKSGED--AKGTNWGNEAGVSVLKWIADQKKNDGFVNL-TAENTMSKFGDGSVHAFESGPWDYDAAKKAVGEDKIGVAVYPTMKIGDKEVQQKAFLGVKLYAVNQAPAGSNTKRISASYKLAA-YLTNAESQKIQFEKRHI-VPANSSIQSSDSVQKDELAKAVIEMGSSDKYTTVMPKLSQMSTFWTESAAILSDTYSGKIKSSDYLKRLKQFDKDIAKTK |
| 3WOA Chain:A ((35-415)) | -------------ESVADKMGMGQSGSG----MKIEEGKLVIWINGDKGYNGLAEVGKKFEKD-TGIKVTVEHP--DKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKA--FQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPN-PPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTS-K-VNYGVTVLPTFKG-QPS---KPFVGVLSAGINAASP-----NKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSY-EEE-LAKDPRIAATMEN---AQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQT--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WOA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44201 for 3109 contacts (-14.2/contact) +
2D Compatibility (PS) -38637 + (NN) -7198 + (LL) 1996
1D Compatibility (HY) -13600 + (ID) 4250
Total energy: -105890.0 ( -34.06 by residue)
QMean score : 0.388
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